Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLEKQHIQYFKNLVGGEDFFTDLAHLNAYCYDATK---ERHLPSGVIFPKNEREISQILKYCNEHRLIVVPRGAGSGFTG-GALSV-SGGLVLSVEKHLDKILEIDTKNLIARVEPGVINKHFQNEVEKLDLFYPPDPASENQSTLGGNVA-ENAGGMRAAKYGITKDYVMALRVVLANGEIIRAGKK---------TIKDVAGFNIAGLMIASEGCLGVISEITLKLLAKPPLKQSAMGVFNHIEDA---MNAVYKTMSSGVTPVAMEFLDNLSIKAVEE-------RFSK--------GL-P--KDAGAILITQVDGVVKEQIAWQLNEIEKHFKANGCVGFKIAQNEQEEQDLWFSRRNASQSISVY---G-------KKKLN-EDVTVPR-ASLPSLLQEVAKISQKYGFKIPCFGHTGDGNVHVN--IMLED--PKRDLEKGHKAMEEIFQAAISLEGTLSGEHGIGLSKAKFMPLAFNHSEMELFRNIKKALDPNNILNPFKMGL |
| 1WVF Chain:A ((17-514)) | --FNKAVQKFRALLGDDNVLVESDQLVPYNKIMMPVENAAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRGQVILD-LKKMNKIIKIDPEMCYALVEPGVTFGQMYDYIQENNLPVMLSFS--APSAIAGPVGNTMDRGVGYTPYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGYGPTLDGMFT--QANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLRMSNTIPNSVVIASTLWEAGSAHLTRAQYTTEPGHTPDSVIKQMQKDTGMGAWNLYAALYGTQE-QVDVNWKIVTDVFKKLGKGRIVT-QEEAGDTQPFKYRAQLMSGVPNLQEFGLYNWRGGGGSMWFAPVSEARGSECKKQAAMAKRVLHKYGLDYVAEFIVAPRDMHHVIDVLYDRTNPEETKRAD-ACFNELLDEFEKEGY---AVYRVNTRFQDRVAQSYGPVKRKLEHAIKRAVDPNNILAPGRSGI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103240 for 3767 contacts (-27.4/contact) +
2D Compatibility (PS) -48088 + (NN) -16646 + (LL) 1260
1D Compatibility (HY) -18800 + (ID) 4500
Total energy: -190014.0 ( -50.44 by residue)
QMean score : 0.389
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