Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEDRLSAEDKKFLEVERALKEAALNPLRHATEELFGDFLKMENITEICYNGDKVVWVLKNNGEWQPFDVRNKKAFSLSRLMHFARCCASFKKKTIDNYENPILSSNLANGERVQIVLSPVTVNDETISISIRIPSKTTYPHSFFEEQGFYNLLDNKEQAISAIKDGIAIGKNVIVCGGTGSGK-TTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGNITSADCLKSCLRMRPDRIILGELRSSEAYDF-YNVLCSGHKGTLTTLHAGSSEEAFIRLANMSSSNSAARNIKFESLIEGFKDLIDMIVHINHHKQCDEFYIKHR |
4PHT Chain:B ((257-370)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILVTGPTGSGKSTTLYAGLQELNSNERNILTVEDPIEFDIDG-IGQTQVNPKVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHL-VMSTLHTNTAVGAITRLRDMGIEPFLISSSLLGVLAQRLVRTLCQDCKEPYEADKEQRKLFDA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4PHT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -58380 for 769 contacts (-75.9/contact) +
2D Compatibility (PS) -11854 + (NN) -3103 + (LL) 11680
1D Compatibility (HY) -6400 + (ID) 1850
Total energy: -69907.0 ( -90.91 by residue)
QMean score : 0.375
|
|
|