Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHEIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATIQSNAYDNALKQQGYLNISHLATSLFVPLIEESILEGELLETCMHYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQKYALKNNACTFPKVEFHASGDVIWLERQAKEWLKL
2W4I Chain:B ((1-254))
MKIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHEIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATIQSNAYDNALKQQGYLNISHLATSLFVPLIEESILEGELLETCMHYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQKYALKNNACTFPKVEFHASGDVIWLERQAKEWLK-
General information:
TITO was launched using:
RESULT:
Template:
2W4I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -255146 for 2275 contacts (-112.2/contact) +
2D Compatibility (PS) -27082 + (NN) -10709 + (LL) 176
1D Compatibility (HY) -41600 + (ID) 12700
Total energy: -347061.0 ( -152.55 by residue)
QMean score : 0.662
(partial model without unconserved sides chains):
PDB file :
Tito_2W4I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W4I-query.scw
PDB file :
Tito_Scwrl_2W4I.pdb
: