Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTIKSIPIRTFILLYKSSPKCVVLASITVLFVGILPSLNILVMIKLIDIVVNLLQKHTHFEYSLLLPTLLLWGALLFLTHVFSGILSSLQTIIAEQFSINIITQLANKLTQVKNLNFFENKDHTIKLNTIHNGLHIRPLNYVSNLFFNLQRIIGLISLFGILFSISIYLPFIMIFATVPCILISNHIAKKHSASIDKLQDQKESMQNYLYSGLDNQKNKDNLLFNFMLNFHHKFIETKELYLNNFVKVAQKNLIFTIYADVLITTLSIALFFLMVFIILSKLIGVGAIAGYIQAFSSTQQQLQDLSFYGKWFFAINKYFENYFCILDYKIPKPETQIKLEEKIHSITFENISFSY-PNSKLIFENFNLSLHSNKIYALVGKNASGKSTLINLLLGFYTPNSGQIIINNKYPLQDLELNSYHQQMSAIFQDFSLYAGYSIDDNLFMQN-NITKEQLKQKREILKSFDENFQNCLNDCNNTLFGAQYNGVDFSLGQKQRIATMRAFLKPSNCIVLDEPSSAIDPIMEKEFLDFIFKKSQSKMALIITHRMNSVKQANEIIVLDQGKLIEQGNF-ETLMKKQGLFCELFLKQQY |
| 2FGK Chain:B ((8-242)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDG-HDLALADPNWLRRQVGVVLQDNVLL-NRSIIDNISLANPGMSVEKVIYAAKLAGAHD--FISELREGYNTIVGEQ--GAGLSGGQRQRIAIARALVNNPKILIFDQATSALDYESEHVIMRNMHKICKGRTVIIIAHRLSTVKNADRIIVMEKGKIVEQGKHKELLSEPESLYSYLYQLQSD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128499 for 1858 contacts (-69.2/contact) +
2D Compatibility (PS) -24517 + (NN) -8683 + (LL) 30728
1D Compatibility (HY) -18000 + (ID) 4150
Total energy: -153121.0 ( -82.41 by residue)
QMean score : 0.472
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