Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRAKMKDIYLDVEKSIKDLQSIFKNADGRDEKLKRFNQEALEVFQKLERESLKELESLKNNEEWENFTIAFYGETGAGKSTLIECLRMFFKEQ------SKVDQQE-RFKRLYSTYQYNHQNFILLD-------VPGIEGSEKKVIDQISNATQKAHAIFMLPKRLILRKKEKKGKGERLKKSKNSLIRKQRYGRFSTNRLIAQEP |
5DGX Chain:A ((46-132)) | -------------------------------------------------------------------TVAFVGKSGSGKTTLTSIISRFYTQHEGEILLDGVDTRELTLENLRSHLSIVSQNVHLFDDTVYNNIAFG-EVSEEEVIDALKRANAYEFVQELSDGINTNIGNNGSKLSGGQRQRISIARALLKNAPVLIFDELESLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DGX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6087 for 289 contacts (-21.1/contact) +
2D Compatibility (PS) -7285 + (NN) -1713 + (LL) 5712
1D Compatibility (HY) -5600 + (ID) 1350
Total energy: -16323.0 ( -56.48 by residue)
QMean score : 0.427
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