Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKNKPTECPAGEKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKATIARKGEGSVLEQIDQGSVLKLPSSLLFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLIQYGVDPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDLSKIHSILDEEFNPHKQQE
3S0H Chain:C ((6-169))
-----------------------------------------------------------------------------------------TSQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDLSKIHSILDNEFNPH----
General information:
TITO was launched using:
RESULT:
Template:
3S0H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57504 for 1143 contacts (-50.3/contact) +
2D Compatibility (PS) -18396 + (NN) -16043 + (LL) 6972
1D Compatibility (HY) -20400 + (ID) 7850
Total energy: -113221.0 ( -99.06 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_3S0H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S0H-query.scw
PDB file :
Tito_Scwrl_3S0H.pdb
: