Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSPVNPIHTNANALNSGAKNEVKDAKNAPKSASKDFSKILNQKISKDKTAPKESPNHSALKATPKDAKEDAKALEKT--PTLPHQHAQNLAKDQQAPTLKD-WLNHPKTHPTAPHEAQHETHEANETNPKTPNETLSK--NEKKPNEVASNAHQTNLPNKNPITPNHANNAIKN---------PTTPTHNVKDPKTLKDIQTLSQKHDLNASNIQAATTPENKNPLNASDHLALKTTQASINHTLTKNDAKNTANLSSVLQSLEKKEPQNKEHANPPNNEKKTPPLKEALQMNAIKRDKTLSKKKPEKTPIHAKTQTI-APSATPENAPKIPLKTLPLMPLIGANPPPNDNAPTPLEKEEKTKEISDNKEKAKETNSSAQSVQNTQASDKTSDNKSTTPKETIRHFTQQLKQEIQEYKPPMSKISMDLFPKELG--KVEVTIQKVGKNLKV-------SVISHNNSLQTF--LDNQQDLKNSLNALGFEGVDLSFSQDSSK-EQQAPKDQPKEPFKEQELTPLKENAL---KSYQENTDHENQETSMQITLYA------- |
| 2DU3 Chain:A ((1-534)) | MKFDPQKYRELAEKDFEAAWKAGKEILAERS---------PNELYPRVGFSFGKEHPLFATIQRLREAYLSIGFSEVVNPLIVEDVHVKKQFGREALAVLDRCFYLATLPKPNVGISAEKIRQIEAITKREVDSKPLQEIFHRYKKGEIDGDDLSYLIAEVLDVDDITAVKILDEVFPEFKELKPISSTLTLRSHMTTGWFITLSHIADKLPLPIKLFSIDRCFRREQGEDATRLYTYFSASCVLVDEE--LSVDDGKAVAEALLRQFGFENFRFRKDEKRSKYYIPDTQTEVFAFHPKLVGSSTKYSDGWIEIATFGIYSPTALAEYDIPYPVMNLGLG---------VERLAMILYGYDDVRKMVYPQIHGEIKLSDLDIAREIKV-------KEVPQTAVGLKIAQSIVETAEKHASEPSPCSFLAFEGEMMGRNVRVYVVEEEENTKLCGPAYANEVVVYKGDIYGIPKTKKWRSFFEEGVPTGIRYIDGFAYYAARKVEEAAMREQEEVKVKARIVENLSDINLYIHENVRRYILWKKGKIDVRGPLFVTVKAEIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DU3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 246929 for 3487 contacts (70.8/contact) +
2D Compatibility (PS) -51363 + (NN) -3236 + (LL) 56
1D Compatibility (HY) -9200 + (ID) 3300
Total energy: 179886.0 ( 51.59 by residue)
QMean score : 0.164
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