Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAIDLAEVTGAKAAQERKKEQPTIANGLDKNAFMKLFLEQLKNQDPTAPMETDKIITQTAQLTQVEMQEENKKTMQEVASAMKSNKETNESLKDFQGALKDTMENLNKGMDDSLKANNALREVSALNSVSMIGKIAETDVSGANFDGNNKLSFSLFFDEKIDASKGVPAIQILNENNELVKTIPLKDYNGQKGYINFEWDGTNEKGEKVPKGNYKIKAEYNLDSQSKQYLQTRIGRGEVESVIFDKGKPMLRMGE-MILPIDSAIEFYKPDQKPLDQKLSDQKPQKLSEQKALEQKISEQKPQEPLDQKLSDQKPQKPLEQKISEQKPLDQKLSDQKPQKPLEQKISEQKPLDQKPQTPPKETA |
3C12 Chain:A ((51-187)) | ---------------------------------------------------------------------------------------------------------------------------QVLKGAALVGHNVLVPSAQVAIDATGSAKGVVAATS-AGF----VNFEITDANGTFVKQLSVP--ASAAGEVSFAWDGTDANGNRMAAGKYGITATQTDTAGAKS-KLATYVDAPVDSVTIGSDGLYLNLTGLGTSPLANVLRVS------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20838 for 939 contacts (-22.2/contact) +
2D Compatibility (PS) -13808 + (NN) 198 + (LL) 14220
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: -25028.0 ( -26.65 by residue)
QMean score : 0.317
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