Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHLAPLIHIPFKALWLGTALSMFLSLNLNAEENPTKTEPKPAKGVKNKPKSPVTNVMMTNCDNLKDFNAKQKEVLKAAYQFGSKENLGYEMAGIAWKESCAGTYKIN---FSDPSAGIYHAYIPSVLKSYGHN-NSPFLRNVMGELLIKDDAFASEVALKELLYWKTRYHDNLKDMIKSYNKGSRWEKNEKANADAEKYYEEIQDRIRRLKESKIFDSQSSNDQELQKSANSNLDLDPIGNAMPQTLAQTETQKSQIEKSQIEEAQTQKSQEMKEAASEQAIKKPLEKEKDKPMYLAQINSADFAPAKKSPKKPAKASPKRSSKNNISVKSNTKTASKNKEVCKNCSPGQRNAILANHITLMQEL |
| 1JUG Chain:A ((19-99)) | -------------------------------------------------------------------------------GYQHITLPN---WVCTAFHESSYNTRATNHNTDGSTDYGILQINSRYWC-HDGKTPGSKNACNISCSKLLDDDITDDLKCAKKIAGEAKGLTPWVAWKSKCRGHDLSKFKC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JUG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27834 for 536 contacts (-51.9/contact) +
2D Compatibility (PS) -7918 + (NN) -369 + (LL) 15500
1D Compatibility (HY) 3600 + (ID) 700
Total energy: -17721.0 ( -33.06 by residue)
QMean score : 0.262
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