Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------MMFELTKKTKFDGEMIGYTEELLTFLVRDFFNGIFKSKVIPKMPIFCGDVKCEDFNALRSLVYLSVLELEETINPNKIPF-----
2V75 Chain:A ((6-94))
YTENLKVIVAEKLAGIPNFNED----IKYVAEYIVLLIVNGGTVESVVDELASLFDSVSRDTLANVVQTAFFALEALQQGESAENIVSKIRMM
General information:
TITO was launched using:
RESULT:
Template:
2V75.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39949 for 497 contacts (-80.4/contact) +
2D Compatibility (PS) -8051 + (NN) -2962 + (LL) 332
1D Compatibility (HY) -4000 + (ID) 450
Total energy: -55080.0 ( -110.82 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_2V75.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V75-query.scw
PDB file :
Tito_Scwrl_2V75.pdb
: