Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNSVIIIESPNKVAKIREITG--AKVFATIGHFMQLKSYD----ENNGFKPTFDYDQEKKKHIFEMIEACKNKKVYIATDPDREGYAIGYMFYQKIKNVASSIYRAEFFEITPSGINKGLQNALLFENTNRQMYQSALARRVADMLLGFTLSPYLGKALGQMKGSSAGRVQTPCLKLIVDRDREIEKFKALPENEKVSYQIQAKINDSANREVTIKHCDEKGEEIKFNDKEEALKLFESLKDNKACLLKDLKNSVVETKPKKPFITSTLLEKASSMLGLSISEVQSLAQNLFEA--------GLITYIRTDAESLSVEFLDETESFYAPIYKDLYLKREYKAGKQSQAEAHEAIRITHPHTTEDLESIVYNANITNQDALKLYQLIFERTIESQGKNAIYDKQDLLFKIKNEYFKCSVKGL--KSAGFLAMFSKKELENDESNDDKDNKEKEQNAQFNLKIDDVLSLNDLVLSTIKRNAPSAYKEADFVKLLENKGIGRPSTYASYLPTLVKREYISISQDKKHIITPTHKGKRVVEVFENAYQFIIDLTYTKQMEEVLDEIVENKSSYVDFISNLNSKCPKIEKLERNDDEIKPSSEGQITYIENILRDLQLNLSEEFKNYKEDNRVAKAFLDRYIKEHEFFKKNNKKASSSNNDENRPATPKQISFAEILAKKHNVKLPKGFKYSMKVCGDFINEYHKK |
| 2GAI Chain:A ((7-545)) | ---KYIVVESPAKAKTIKSILGNEYEVFASMGHIIDLPKSKFGVDLEKDFEPEFAVIKGKEKVVEKLKDLAKKGELLIASDMDREGEAIAWHIARVTNT-LGRKNRIVFSEITPRVIREAVKNPR---EIDMKKVRAQLARRILDRIVGYSLSPVLWRNFK--SNLSAGRVQSATLKLVCDREREILRFVPKK-----YHRITVNFDGLTA-EI--DVK-----EKKFFDAETLKEIQS-I---DELVVEEKKVSVKKFAPPEPFKTSTLQQEAYSKLGFSVSKTMMIAQQLYEGVETKDGHIAFITYMRTDSTRVSDYAKEEARNLITEVFGEEYVG------------AHEAIRPTNVFMTPEEA-----GKYLNSDQKKLYELIWKRFLASQMKPSQYEETRFVLRTKDGKYRFKGTVLKKIFDGYEKVWKTERN----------------TGEFPFEEGESVKPVVVKIEEQETKPKPRYTEGSLVKEMERLGIGRPSTYASTIKLLLNRGYIKKI--R-GYLYPTIVGSVVMDYLEKKYSDVVSVSFTAEMEKDLDEVEQGKKTDKIVLREFYESFSSVFDRNDRIVVDFPTNQKCSCGKEMRLSFGKYGFYLKCECGKTRSVKNDEIAVIDDGKIFL----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187501 for 4133 contacts (-45.4/contact) +
2D Compatibility (PS) -52950 + (NN) 1629 + (LL) 7252
1D Compatibility (HY) -28400 + (ID) 7700
Total energy: -267670.0 ( -64.76 by residue)
QMean score : 0.422
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