Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------MGFQNENKLKVGASVKATINDKVVEAKVISIGFNR-VTLRSEKGQRSHLRFQ------------------------------
2DOQ Chain:D ((2-84))
PLGSNEEANRFANQAKLRVQEAVFYIWSDKTLKYS-------QMANDEAESFRNTWLLFRSFQQWITLTQTFKEQSRLADQAFLNKMFRK
General information:
TITO was launched using:
RESULT:
Template:
2DOQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8965 for 176 contacts (50.9/contact) +
2D Compatibility (PS) -4673 + (NN) -2645 + (LL) 452
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -51.0 ( -0.29 by residue)
QMean score : 0.156
(partial model without unconserved sides chains):
PDB file :
Tito_2DOQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DOQ-query.scw
PDB file :
Tito_Scwrl_2DOQ.pdb
: