Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEIDNQTPLESDFLLLEKIADVLASTQIIELVLVSDETMREINRDLRDCDYATDVLSFPLEAI---PHTPLGSVVINAPLAQENALKLGHSLEDEIALLFIHGVLHLLGYDHEK-DKG-EQRQKEGELIKAFDLPLSLIERTQEC
1XM5 Chain:A ((36-152))
------------------------QEESEVTIRVVDTAESHSLNLTYRGKDKPTNVLSFPFEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIA-----
General information:
TITO was launched using:
RESULT:
Template:
1XM5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48259 for 764 contacts (-63.2/contact) +
2D Compatibility (PS) -12568 + (NN) -7210 + (LL) 2644
1D Compatibility (HY) -7600 + (ID) 1800
Total energy: -74793.0 ( -97.90 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_1XM5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XM5-query.scw
PDB file :
Tito_Scwrl_1XM5.pdb
: