Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQKRVVILLLDSFGIGASEDAKDFGDLGANTLGNIAKACFNNLADSNDRNGVLKLPNLEGLGLG-LSALKAAN--ELPLGFQLKPNLIGAYAYAKELSSAKDTISGHWEMMGAPVLFEWGYFKDKNDSFPKEILDEIMHKTKIKGYLGNCHASGTEIIKDLGEKHLETLYPIFYTSADSVFQIAAHEERFGLDHLYALCEEAFQIL--EPLKIARVIARPFIGTNRENFKRTANRKDYAIKPHKKLLFETFIEEKQGEVISIGKIADIYAHVGITQKFKAGSLMELCDVTLDQVKNAPNNSLIFTNFVHFDSDYGHRRDVSGYANALEYFDARLKEVLDNLRENDLLILCADHGCDPSFKGTDHTREYIPVLFYHKDLQPAF--LGKSETFADIGQSIAYFLGLSPLDYGKNLLNFKGQP |
3UN2 Chain:C ((10-395)) | --KRIFLVVMDSVGIGEAPDAEQFGDLGSDTIGHIAEHM----------NG-LQMPNMVKLGLGNIREMKGISKVEKPLGY---------YTKMQEKSTGKDQMTGHWEIMGLYIDTPFQVFPE---GFPKELLDELEEKTGRK-IIGNKPASGTEILDELGQEQMETGSLIVYTSADSVLQIAAHEEVVPLDELYKICKIARELTLDEKYMVGRVIARPFVG-EPGNFTRTPNRHDYALKPFGRTVMNE-LKDSDYDVIAIGKISDIYDGEGVTESLRTKSNMDGMDKLVDTL-NMDFTGLSFLNLVDFDALFGHRRDPQGYGEALQEYDARLPEVFAKLKEDDLLLITADHGNDPIHPGTDHTREYVPLLAYSPSMKEGGQELPLRQTFADIGATVAENFGVKMPEYGTSFLNEL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UN2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -297219 for 3475 contacts (-85.5/contact) +
2D Compatibility (PS) -40063 + (NN) -7735 + (LL) 1152
1D Compatibility (HY) -32800 + (ID) 8950
Total energy: -385615.0 ( -110.97 by residue)
QMean score : 0.553
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