Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSIGSMGKPIEGFLVAAIQFPVPIVNSRKDIDHNIESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAKWLSEEFLLDVPGKETELYAKACKEAKVYGVLSIMERNPDSNENPYNTAIIIDPQGKIILKYRKLFPWNP--IE-PWYPGDLGMPVCEGPGGSKLAVCICHDGMIPELAREAAYKGCNVYIRISGYSTQVNDQWILTNRSNAWHNLMYTVSVNLAGYDNVFYYFGEGQICNFDGTTLVQGHRNPWEIVTGEIYPKMADNARLSWGLENNIYNLGHRGYVAKPGGEHDAGLTYIKDLAAGKYKLPWEDHMKIKDGSIYGYPTTGGRFGK |
| 3P8K Chain:A ((14-274)) | ------LVPRGSHMKVQIYQLPIV----FGDSSKNETQITQWFEKNMN--AEVDVVVLPEMWNNGYDLEHL--NEKADNNLGQSFSFIKHLAEKYKVDIVAGSVSNIRN--NQIFNTAFSVNKSGQLINEYDKVHLVPMLREHEFLTAGEYVAEPFQLSDGTYVTQLICYDLRFPELLRYPARSGAKIAFYVAQWPMSRLQHWHSLLKARAIENNMFVIGTNSTGFDGNTEYAGHSIVINPNGDLVGELN-ESADILTVDLNLNEVEQQRENIPVFKSIKLDLYK---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156771 for 2277 contacts (-68.8/contact) +
2D Compatibility (PS) -28186 + (NN) -16658 + (LL) 2284
1D Compatibility (HY) -6400 + (ID) 2350
Total energy: -208081.0 ( -91.38 by residue)
QMean score : 0.500
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