Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHVFEVYPKVNVFLKILHK-EGAYHKIISRMCLVKNKLKDIISVKN-ALSFSLKG-DFDCPLEENSLFKALQVLKKFLVQKNFSHSVIKSLDTLAIEVEKNIPTQAGLGGGSADAGGLLYHLNQMFDWRLSLKELYTMGSLVGADTNFFISQYKSANATSYGEVIENFEEESLEDRLEIYAPNHVFCSTKAVYQAYKPETCFFQAKEWLKKTSLECLKTYDRNELNDLLKPALRTNPALKDIESQL-S-KEWFFSGSGSAFFRLKNTQKGANETHCQQ |
| 2WW4 Chain:A ((1-257)) | MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLD-YGDTISIELRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAAD----SGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGH-AAFAEGVGEILTPVD--PPEKWYLVAHP-GVSIPTPVIFKDPELPRNTP-----KRSI----ETLLKCEFSNDCEVIARKRFREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99569 for 2087 contacts (-47.7/contact) +
2D Compatibility (PS) -26492 + (NN) -3665 + (LL) 1096
1D Compatibility (HY) -8400 + (ID) 2800
Total energy: -139830.0 ( -67.00 by residue)
QMean score : 0.315
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