Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNPIEIKAKTLEEALIQASIALNCPIINLQYEVIQMPSKGFLNIGKKEAIILVGVKESVKEVKEESVKEIHQNAEEKQSLGIKTPQEEIITPKPPKKTPKEESHNGDKLHEIKQELKDLFSHLPYKINKVEVSLYEPGVLLIDIDGEDSALLIGEKGYRYKALSYLLFNWIHPAYGYSIHLEISTFLQNQEKVMEAQLQSTIMTVHEVGKGQMKAPDGVLTYIALKKLRKAFPNKYVSIKTNLNDEKYIVINDFNNE |
| 1K0R Chain:A ((283-340)) | ----------------------------------------------------------------------------------------------------------------PARFVANALSPAKVV--SVSVIDQTARAARVVVPDFQLSLAIGKEGQNARLAARLTGWRIDIRGDAPP------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K0R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40533 for 379 contacts (-106.9/contact) +
2D Compatibility (PS) -6242 + (NN) -2276 + (LL) 14348
1D Compatibility (HY) 2000 + (ID) 450
Total energy: -33153.0 ( -87.47 by residue)
QMean score : 0.585
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