Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKIGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSSAKNPMFSLDERLKMMQLATKSFKNVECVAFEGLLADLAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHKGDASHLVPKEIYPFISKV
3OTW Chain:C ((7-162))
MQKIGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSSAKNPMFSLDERLKMIQLATKSFKNVECVAFEGLLANLAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHKGDASHLVPKEIYPLISK-
General information:
TITO was launched using:
RESULT:
Template:
3OTW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121469 for 1233 contacts (-98.5/contact) +
2D Compatibility (PS) -16549 + (NN) -4175 + (LL) 192
1D Compatibility (HY) -24800 + (ID) 7650
Total energy: -174451.0 ( -141.48 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_3OTW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OTW-query.scw
PDB file :
Tito_Scwrl_3OTW.pdb
: