Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHTVLQIGAGGVGSVVAHKMGMNRDVFKNIILASRSL---DKCHAIKESMLKKGLGEIGVEQVDADDTQALIALIQKHKPKVVVNVALPYQDL-----TIM-QACLETKTHYIDTANYEHPDLAKFEYKEQWAFDKAYKEAGILGVLGAGFDPGVTNAYVAHAQRHHFDTIHTLDILDCNAGDHKRPFATNFNPEINLREVSSKGRYYENGKWIETKPLEIKQVWAYPQIGEMDSYLLYHEELESLVKNVKGLRRARFFMTFSQNYLTHMKCLENVGMLGIKEIEHQGVKIVPIQFLKTLLPDPESLAKDTTGKTNIGCYMTGIKNNQDKTLYIYNVCDHKKCYEEVGSQAISYTTGVPAMCAAKMICNDTWSVEHFKAGVFNVEELNTDPFMEELIKQGLPYEVIER |
| 3TNL Chain:A ((155-295)) | -KKMTICGAGGAATAICIQAALDG-V-KEISIFNRKDDFYANAEKTVEKINSK--TDCKAQLFDIEDHEQLRKEIA--ESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPTK----------TRLLEIAEEQGCQTLNGLG-------MMLWQGAKAFEIWTHKEMPVDYIKEILF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86447 for 1010 contacts (-85.6/contact) +
2D Compatibility (PS) -14403 + (NN) -9009 + (LL) 15852
1D Compatibility (HY) 400 + (ID) 1050
Total energy: -94657.0 ( -93.72 by residue)
QMean score : 0.513
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