Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLETSSHFLKSFRLKRYIGFLLISLALLITPFVRIDGAHLFLISFEHKQLHFLGKIFSAEELQILPFMVILLFIGIFFITTSLGRVWCGWACPQTFLRVLYRDVIETKIFKLHKKISNKQESPKNTPSYKIRKALSVLLFAPVVAGLMMLFFFYFIAPEDFFMYLKNPSDHPIAMGFWLFSALVVLFDIVVVAERFCIYLCPYARVQSVLYDNDTLNPIYDEKRGGVLYDNQGRLFPLPPKKRSAENECVNCLH--CVQVCPT--HIDIRKGLQL----ECINCLECVDACTITMAKYNRPSLIQWSSTNAINTRQKVRLVRLKTIAYMGVIAVVVALLIITSFKKERMLLDINRNSDLYEIRSSGYVDNDYVFLFHNTDNKDHEFYFKILGQKDIQIKKPLNPIAIKAGQKIKAVVILRKPLKGNATEYKHAKDALIPITIQAYSVDDKNITIERESVFIVPSED |
| 2VPX Chain:F ((57-110)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QCLHCENPPCVPVCPTGASYQTKDGLVLVDPKKCIACGACIAACPYD-ARYLHPAGYVSKCTFCAHRLEKGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAERVDVLRPEQGTRPKLFYLNAPSKKGLTRESEVHH-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VPX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15351 for 240 contacts (-64.0/contact) +
2D Compatibility (PS) -4436 + (NN) 2002 + (LL) 27716
1D Compatibility (HY) -6000 + (ID) 1000
Total energy: 2931.0 ( 12.21 by residue)
QMean score : 0.380
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