Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MEGVLNFLTN-INVIFTLLGYLIGGIPFGYALMKIFY------GMDITKIGSGGIG-ATNVLRALQSKGVSNAKQMALLVLILDLFKG-MFAVFLSKLFGL-DYSLQWMVAIASILGHCYSPFLNFNGGKGVSTIMGSVVLLIPIESLIGLTVWFFVGKVLKISSLASILGVGTATVLIFFV-PYMHIPDSVNILKEVGTQTPMVLIFIFTLIKHAGNIFNLLTGKEKKVL------------------------------------------------------------------- |
| 2GNO Chain:A ((4-299)) | DQLETLKRIIEKSEGISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEGENIGIDDIRTIKDFLNYSPELYTRKYVIVHDCERMTQQAANAFLKALEEPPEYAVIVLNTRRWHYLLPTIKSRVFRVVVNVPKEFRDLVKEKIGDLWEELPLLERDFKTALEAYKLGAEKLSGL----MESLKVLETEKLLKKVLSKGLEGYLACRELLERFSKVESKEFFALFDQVTNTITGKDAFLLIQRLTRIILHENTWESVEDQKSVSFLDSILRVKIANLNNKLTLMNILAIHRERKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GNO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183987 for 1557 contacts (-118.2/contact) +
2D Compatibility (PS) -21873 + (NN) -1656 + (LL) 660
1D Compatibility (HY) 800 + (ID) 1100
Total energy: -207156.0 ( -133.05 by residue)
QMean score : 0.276
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