Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLDYIIAAHGR-YAQEVKDSCQMITGQTTNISAITFTEEMGVTDVLDAYMAVYSP-----VNETAIIVDIVGGTPCNAAQMFSTK-HPEVKVVSGLSLGLIIPLSLGE-S---LEEAMLGAKDNIQFVEQKASHTIVSDDGEEED
3GDW Chain:A ((5-125))VGVFVLMHGDSTASSMLKTAQELLGTS-IGTAMNMPLTMEVQTMYEQLRNQVITQKESLNNGILLLTDM--GSLNSFGNMLFEETGIRTKAITMTSTMIVLEAIRMASVGRSLEDIYQNIQLSF--------------------


General information:
TITO was launched using:
RESULT:

Template: 3GDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94298 for 841 contacts (-112.1/contact) +
2D Compatibility (PS) -12250 + (NN) -6416 + (LL) 1296
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -116468.0 ( -138.49 by residue)
QMean score : 0.451

(partial model without unconserved sides chains):
PDB file : Tito_3GDW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GDW-query.scw
PDB file : Tito_Scwrl_3GDW.pdb: