Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGSNGIKHVRVDERLIHGQVATMWTNTIKATRIMIVDDAVVKNEMEKVALKTAVPAGVKLSILTVKGAANNINNDKYAGQQVFLIVKSPHALRGLVDAGVELPQINVGNMSTKAGSRQIKKSVSVTDENLEDFDYLAQKGIKITAQMVPSEDAVEFANLLKK
1VSQ Chain:C ((2-162))-DYMVIGLARIDDRLIHGQVATRWTKETNVSRIIVVSDEVAADTVRKTLLTQVAPPGVTAHVVDVAKMIRVYNNPKYAGERVMLLFTNPTDVERLVEGGVKITSVNVGGMAFRQGKTQVNNAVSVDEKDIEAFKKLNARGIELEVRKVSTDPKLKMMDLISK


General information:
TITO was launched using:
RESULT:

Template: 1VSQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105881 for 1211 contacts (-87.4/contact) +
2D Compatibility (PS) -17606 + (NN) -6430 + (LL) 208
1D Compatibility (HY) -14400 + (ID) 2750
Total energy: -146859.0 ( -121.27 by residue)
QMean score : 0.632

(partial model without unconserved sides chains):
PDB file : Tito_1VSQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VSQ-query.scw
PDB file : Tito_Scwrl_1VSQ.pdb: