Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------MDLAIWQIILLVILAACTILDALTLVIGLNFPVITGTLAGIIMGDMVLGLAIGATLQLMVLGVGTYGGASIPDFTTGAIVGTVFAVLSGQDAEFAIGLAIPVGLLMVQLDILARFTNTFFLHRIDSNIASGNI-SAVKRNIWYGAL----------PWALSRAVPVFIMLTFGQSVVDFILNEI----------PEWLMGGLRVAGGILPVVGIAILLRYLPTNKFVAYLI-IGFVAAAYLKVPMLGVALIGVALAIIYFKQNFKNPVAAGANGAALVGEENEDGEYED-------- |
| 4OR2 Chain:A ((5-372)) | DLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLIPVRYLEWSNIESIIAIAFSCLGILVTLFVTLIFVLYRDTPVVKSSSRELCYIILAGIFLGYVCPFTLIAKPTTTSCYLQRLLVGLSSAMCYSALVTKTNRIARILARKPRFMSAWAQVIIASILISVQLTLVVTLIIMEPPMPILSYPSIKEVYLICNTSNLGVVAPLGYNGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTCFAVSLSVTVALGCMFTPKMYIIIAKPE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OR2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131856 for 2035 contacts (-64.8/contact) +
2D Compatibility (PS) -27140 + (NN) 937 + (LL) 0
1D Compatibility (HY) -8400 + (ID) 2050
Total energy: -168509.0 ( -82.81 by residue)
QMean score : 0.022
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