Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLTFFDKARELTEEL-EKTQAESIHQAAKLVADSIMNDGIIQAFGSGHSYAAAIEVCGRAGGLIPSKVIMDPAGGYYESIEGVGSLLTHRLQAKPNDIFFLISNSGRNPMGIELAEWIKSQGCKLIVVTALDASQTAASRHSSGKLLYEFADVILDNRSVQGDAALELEGLEGKVC-G--TSSFSAVLLLQQTIYEAVELMLEKGYTPPVYRSANIDGGYEYNFAIEDKFADRIFHL |
| 1VIM Chain:A ((15-198)) | --LRFLEVVSEHIKNLRNHIDLETVGEMIKLIDS----ARSIFVIGAGRSGYIAKAFAMRLMHLGYTVYVVG----------ET---V--TPRITDQDVLVGISGSGETTSVVNISKKAKDIGSKLVAVTGKRDS-----------SLAKMADVVMVVKGKMKQ--E-RDEILSQLAPLGTMFELTAMIFLDALVAEI---MMQKHLTEKDLE-ARHAVLEEG--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VIM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93897 for 1400 contacts (-67.1/contact) +
2D Compatibility (PS) -19500 + (NN) -8410 + (LL) 3236
1D Compatibility (HY) -6000 + (ID) 1900
Total energy: -126471.0 ( -90.34 by residue)
QMean score : 0.483
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