Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILKEVCIENTTNLVNVIEAGANRVELCDNLAEGGTSVSY----GVAKHVVKICHEQNVSVMAMVRPRKGNFVYTKEEISVMIDDILMYKKIAVDGVVFGCITDSGLLDKPAINELLKAAA--G--LEVTFHMAFDELVETEKLSAIDWLVEQGVTRIL------THGGDGAKLPEETFVQWRKYIDYA---AGRIIILPGGGIKSHNLEWIIKETGAAEIHGTDLFGER
3INP Chain:A ((45-225))
------------DVKAVLAAGADNIHFDV--MDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPV--------------DALIESFAKAGATSIVFHPEASEH------IDRSLQLIKSFGIQAGLALNPA-------TGIDCLKYVES-NIDRVLIMSVNPGF--QK--FIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAV-CGVNAFVAGSA----
General information:
TITO was launched using:
RESULT:
Template:
3INP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96162 for 1162 contacts (-82.8/contact) +
2D Compatibility (PS) -17570 + (NN) -7320 + (LL) 3840
1D Compatibility (HY) -6400 + (ID) 1300
Total energy: -124912.0 ( -107.50 by residue)
QMean score : 0.385
(partial model without unconserved sides chains):
PDB file :
Tito_3INP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3INP-query.scw
PDB file :
Tito_Scwrl_3INP.pdb
: