Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPSMKRQIAQTGIIHRPLPIETEHALETLAKKKQVLSSRTLFSSKQHVSLEFTHQGAGDFTISGQDEIKLSSPVVMPHWPAGAPDDGDYTNFGNVTISASIGNEDWSGFNRVRIQVFPDFPGVTNPYLMISFKNDGTVKVPDIYGREGVHG---VNLI-NHEWNDVIFEIEGLP-RDRMTEMSFSYYLNGPERLTAGTMELFINEIKLEQISEPEISKGWLPQNNTLIYSHNGYSKDMPKVAFCANKH-AATTFTIHDKETDKVVFTGKSYQNA--TETGNFVILDFSDLQTVGE-YYLKFAD-----MQTEIFQIGTSEVIWESSIWKSLNFIFCERCGCPVFGKHTTCHADIIAEHDGKQLSFNGGWHDAGDVSQQLIQTAEVTMALYEMAASLPEKEETLRMRLLEEGEWGLDFILKTRFGDGFRATSAGMTRWTDGLVGGMDDAIARVHNQAYENFYCAGIEAYIGSQIADNATMQNHLLRIAEEDLLFAIKELEKHGTSQKPIFWEHTYQTSESLYYATASWAASMVYQLTNKEIYAEKAAEWLDLMLEAQEKAGIRDSETSELYKGFFYRDKSHKVIQHFNHQAREHLYLLALEAALETQPSHAEKQTWLQAVEMYGDYLKKVTRFTKPYPLIPAGLYKKDEYLDEASFHLQHLLIDERAIEEYQLQFEQGIKINDEVALRKFPIWFSFRGNNAILLSAGKAASIAGKILKDKALLDIAEGQLQWVIGMNPFGQSMMHGEGYRYAQQYSVLNGEITGEIPVGMETFRNEDEPYWPEFNNATYKEVWVGNAGKWMSIVADLNKITGKS |
| 3K4Z Chain:A ((82-280)) | -----------------------------------------------------------------------------------------------------------GHTYRVRLKIWADAS--CKVYIKIG--QMGE-----PYA-EYWNNKWSPYTLTAGKVLEIDETFVMDKPTDDTC--EFTFHLGGELA-ATPPYTVYLDDVSLYDP-EYTKPVEYILPQPDVRVNQVGYLPEGKKVATVVCNSTQPVKWQLKN-AAGVVVLEGYTEPKGLD----YVHWLDFSDFATEGIGYYFELPTVNSPTNYSHPFDIRK--D------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K4Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65938 for 1134 contacts (-58.1/contact) +
2D Compatibility (PS) -19438 + (NN) -3406 + (LL) 43468
1D Compatibility (HY) -9200 + (ID) 1700
Total energy: -56214.0 ( -49.57 by residue)
QMean score : 0.296
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