Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----LSNFTA--KVPLSERMADVLISKDRWKDDE---EGYLKVKYGLEIILINVMKFALVYGIALVTGLLLQT-VTVHLSYLWLRRYSFGLHATKTLNCTLISLLMFVLAPFVFQNIPSNNWIVLGTFGFILLNMFLFAPADTESLPLIGEE---HRKTLKRKAMIGTLILTGIALLIPFAEMKTLIMVGSLFQVISINPLTYKLLKRRYRNYEKYE------------ |
| 1QRE Chain:A ((38-247)) | TVDEFSNIRENPVTPWNPEPSAPVIDPTAYIDPQASVIGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQDGVVLHALETINEEGEPIEDNIVEVD-------------------GKEYAVYIGNNVSLAHQSQVHGPAAVGDDTFIGMQAFVFKSKVGNNCVLEPRSAAIGVTIPDGRYIPAGMVVTSQAEADKLPEVTDDYAYSHTNEAVVYVNVHLAEGYKETS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QRE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140281 for 1507 contacts (-93.1/contact) +
2D Compatibility (PS) -19383 + (NN) 8023 + (LL) 2224
1D Compatibility (HY) 2800 + (ID) 950
Total energy: -147567.0 ( -97.92 by residue)
QMean score : 0.090
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