Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MAQQTMGGAGAASTIDINPDEMTHIAKELLAIANEFEGVIKPAVNQLKANKYLTKGKAKKAMDKVPKANERVM-------ELQDQYNMASSVVFDILQTMVDADRDIA-------EKIIAALEV----------------------
1AEP Chain:A ((6-158))
NIAEAVQQLNHTIVNAAHELHETLGLPTPDEALNLLTEQANAFKTKIAEVTTSLKQEAEKHQGSVAEQLNAFARNLNNSIHDAATSLNLQDQLNSLQSALTNVGHQWQDIATKTQASAQEAWAPVQSALQEAAEKTKEAAANLQNSIQSAVQK
General information:
TITO was launched using:
RESULT:
Template:
1AEP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16827 for 679 contacts (-24.8/contact) +
2D Compatibility (PS) -12099 + (NN) -7151 + (LL) 0
1D Compatibility (HY) 1200 + (ID) 950
Total energy: -35827.0 ( -52.76 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_1AEP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AEP-query.scw
PDB file :
Tito_Scwrl_1AEP.pdb
: