Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRGQEEIDKEQYQVLFIKERLIPCVLGAVIGDCLGVPVEFKDREYLK--QNPIVEMIGYGTYNQPKGTWSDDSSLTFALMESLI-S-GYDINRIVNNMVSFMDDGFWTPYGEVFDIGSVTRESLNRYKNGVSVFECGGKDNFDNGNGAIMRIMPLVFY-LGKDFSFGKKN-KITEEVTRITHAHPRSILGSYVYIELLQNLFANMDKKLAYEEMQNYIRKNYSDYPFKDELQYYNNILEGNLYELKESNIKSSGYVVDTLEASIWAFLTTNSYKEAVLKAVNLGGDTDTIAFITGSLAGIYYKMEQIPVNWIDQIAKKEDILNLCNRFIESLIKQ |
| 3O5T Chain:A ((3-290)) | -------------DHSIRSRALGAYLGLACGDALGATVEFLTKGEIAHQYGVHKHIKGGGWLKLPAGQVTDDTEMSIHLGRAILAAPEWDARRAAEEFAVWLKGV-------PVDVGDTTRRGIRRFIMHGTL--SEPESEYHAGNGAAMRNLPVALATLGD---D-AAFERWTVEQAHITHCNAMSDAATLTLGHMVRRLVLGGDVRDVRDESNKLIA----------KHRQF------KFQ--PY-RGLATAYIVDTMQTVMHYYFQTDSVESCVVETVNQGGDADTTGAIAGMLAGATYGVETIPPRWLRKLDRDV-YNEICAQVDGLLAR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181681 for 2608 contacts (-69.7/contact) +
2D Compatibility (PS) -29371 + (NN) -6474 + (LL) 1900
1D Compatibility (HY) -7200 + (ID) 3500
Total energy: -226326.0 ( -86.78 by residue)
QMean score : 0.482
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