Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKNFKKLKSLHELPTPLILYNCWDVASARAIQQGGAPVIATSSYAIAESLGAVDGEHLTFDEMFSVISRIAENVSLPLTVDIETGYARNLEELAQNVERLLAIGVCGVNLEDQLIGVTNPGLCSTEEQCDKIKTIKETAAKMSTEIFINARTDVFFQGRDEAVD--LVEEAISRANAYKEAGADAIFIPGLLSPNLIRAFVEKSPLPVNVMRMDGMLSNEDLQKIGVKRISYGPFSFFQANLAIQQEVERIFEGGKAL
4MG4 Chain:E ((18-249))
-------FRSLHRAGQPLALFNVWDAGSARVVADAGAVALATGSWSVAAANGFVDGEQMPRALMMEVLERIVRATDLPVTVDLESGYGERPEDVAETIAMSIRAGAIGCNLEDSFPSTGE--LRDVDEAAARIAAARQAADRAGVDYFINARTDVFFKAATETHDERLLDATLARARAYAAAGADGLFVPGLRSPALIRALTAASPLPVNVMRVAETPTLAELAEYGVARISHGPYPYLQA------------------
General information:
TITO was launched using:
RESULT:
Template:
4MG4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153421 for 2010 contacts (-76.3/contact) +
2D Compatibility (PS) -25189 + (NN) -10821 + (LL) 1856
1D Compatibility (HY) -15200 + (ID) 4850
Total energy: -207625.0 ( -103.30 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_4MG4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MG4-query.scw
PDB file :
Tito_Scwrl_4MG4.pdb
: