Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLKQLTNQLFTSTIFLV-------------------TMLFIIPPTFAIA---DGSKVSFYE-----YIYGAPLRWLTVISTTEKKGAFLEMFFSENEGINIQW------LNLIINFLLVFLVITIIFSLAKKFYNKKNA--------
2HF6 Chain:A ((1-149))
MEALILEPSLYTVKAILILDNDGDRLFAKYYDDTYPSVKEQKAFEKNIFNKTHRTDSEIALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALR
General information:
TITO was launched using:
RESULT:
Template:
2HF6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55425 for 663 contacts (-83.6/contact) +
2D Compatibility (PS) -11609 + (NN) -3764 + (LL) 0
1D Compatibility (HY) -5200 + (ID) 700
Total energy: -76698.0 ( -115.68 by residue)
QMean score : 0.143
(partial model without unconserved sides chains):
PDB file :
Tito_2HF6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HF6-query.scw
PDB file :
Tito_Scwrl_2HF6.pdb
: