Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVISIILVVLIAFLAGIEGILDEFQFHQPLIACTLIGLVTGNLTACIILGGTLQMIALGWANIGAAVAPDAALASVASAIILVLGGQGVAGIPSAIAIAIPLAVAGLFLTMIVRTLAVPIVHLMDRAAEKGNIRSVEWLHISAICMQGVRIAIPAAALLFIPADSVQSFLEAMPAWLTDGMAIGGGMVVAVGYALVINMMATKEVWPFFVIGFVVAAISQLTLIAIGALGVALALIYLNLSKMGGGNSNGGGGGNSRDPLGDILNDY |
| 2KV5 Chain:A ((1-33)) | --------------------------------------------------------------------------------------------MKDLMSLVIAPIFVGLVLEMISRVLDEEDDSRK----------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2KV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -10172 for 126 contacts (-80.7/contact) +
2D Compatibility (PS) -3316 + (NN) -639 + (LL) 18224
1D Compatibility (HY) -1600 + (ID) 400
Total energy: 2097.0 ( 16.64 by residue)
QMean score : -0.524
|
|
|