Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYFVYDIGGTFVKFALMENNGTVKMKDKFPTTAKS-A----EELVAQMVEKWRPYR-T--EVKGIAVSCPGVVDTEKGVIYQGGSLLFMHE-KNLAEMLARECHVPVVLQNDAKSAALAELWLGVAKNVHSAAILTLGSGVGGGIIMDGKLQSGYHLMAGEVSFMETSFDT---KKLRGTFFGRTGSAVELIKRIASKKNL-------------PNKKDGEHVFELINQGDEEANAIFDAYIYELASQILNIQYLIDPEIIAIGGGISA-QPVVVERLNDAVAEIKAANPYHAAQPKIVTCHFQNDANLYGALYNFFLQMDAQNKR |
| 2QM1 Chain:A ((7-324)) | KIIGIDLGGTTIKFAILTTDGVVQQKWSIETNILEDGKHIVPSIIESIRHRIDLYNMKKEDFVGIGMGTPGSVDIEKGTVVGA-YNLNWTTVQPVKEQIESALGIPFALDNDANVAALGERWKGAGENNPDVIFITLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDPNGFDCTCGKRGCLETVSSATGVVRVARHLSEEFAGDSELKQAIDDGQDVSSKDVFEFAEKGDHFALMVVDRVCFYLGLATGNLGNTLNPDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQ--VRNSTKIKLAELGNEAGVIGAASLALQFSK----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QM1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -196522 for 2494 contacts (-78.8/contact) +
2D Compatibility (PS) -31602 + (NN) -13133 + (LL) 128
1D Compatibility (HY) -12800 + (ID) 3900
Total energy: -257829.0 ( -103.38 by residue)
QMean score : 0.562
|
|
|