Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MFEVNDTTYILRFNKQKVKTVELTSGISLVAALTANK--------------GILSYQVIETLFVSGLVEEKGLVPVKQKEALEIFDKLVEEQGLISLNVAVIEKLQEDMGFLFR
1XSF Chain:A ((1-108))
NVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAINTGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGW-----GAWPVCAARAGAR--
General information:
TITO was launched using:
RESULT:
Template:
1XSF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42126 for 645 contacts (-65.3/contact) +
2D Compatibility (PS) -9615 + (NN) 1379 + (LL) 696
1D Compatibility (HY) 2000 + (ID) 550
Total energy: -48216.0 ( -74.75 by residue)
QMean score : 0.376
(partial model without unconserved sides chains):
PDB file :
Tito_1XSF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XSF-query.scw
PDB file :
Tito_Scwrl_1XSF.pdb
: