Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDLFLELNGKVHSLSETFPGLSVQEVSRQSPQLSMETAE---IAGTDGVIPGMTQFKPFIFSAKCNLQALDIPDYHLAVREIYEFLFQRDSYYIWSDQMPGIRYEVHPKPVDFSRESDRVGLLTIEFDVFKGYAESRGTSLDPMT--FEVDLWQM---GMNLSNRDDLFY--IFKENTFRVYNAGSDRVNPLMRHELDIAMTANGTPTIHNLTTGESFEYQKELRKTDVLLLNNIYPLVNNRRVGKDTNHGIITLEKGWNDFEIKGVTDVTIAFNFPFIYR |
| 4DOX Chain:A ((11-174)) | ----------------------------IAFPAITQEQMSSIKVDPTSNLLPSQEQLKSV--STLMVAAKVPAASVTTVALELVNFCYDNGS-------------------SAYTTVTGPSSIPEISLAQLASIVKASGTSLRKFCRYFAPIIWNLRTDKMAPANWEASGYKPSAKFAAFDFFDGVENP--AAMQPPSGLTRSPTQEERIANATN------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4DOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -26166 for 1067 contacts (-24.5/contact) +
2D Compatibility (PS) -15810 + (NN) -1004 + (LL) 7272
1D Compatibility (HY) -5600 + (ID) 1300
Total energy: -42608.0 ( -39.93 by residue)
QMean score : 0.123
|
|
|