Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDEETLLERGYRKYRGADVDIYFNTNVCEHSGNCVKGNV----ELFNLDRKPWIMPDNVSKEEAKRVIHTCPS-GALQYIEK
1GTE Chain:A ((944-1006))
------------------VVAVIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVTDTCTGCTLCLSVCPIIDCIRMVS-
General information:
TITO was launched using:
RESULT:
Template:
1GTE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21268 for 373 contacts (-57.0/contact) +
2D Compatibility (PS) -5634 + (NN) 1269 + (LL) 1184
1D Compatibility (HY) -4000 + (ID) 350
Total energy: -28799.0 ( -77.21 by residue)
QMean score : 0.236
(partial model without unconserved sides chains):
PDB file :
Tito_1GTE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GTE-query.scw
PDB file :
Tito_Scwrl_1GTE.pdb
: