Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPTKNHRLPKKHLPIRKSTTRFTKGVVTVSRID-------IGEIQTF-AYQLHTANEAARKSIKDIKNAVKNYTEDGSLKG--KAIDASKNYYQMTYFPLCDAIIEAMNESEERLAQYIADFHAQVDSSADARIDADGLYELGKMIDRIEAKKEALAQRMNTGTEGQMQSYRSQLSIAYKQENILEKYLAFEQSHGGFFDNLTDLVRGIQQTIREL-QSNIQFNSKTGTYDMSKLNFTTVTRMQNASGKALNDNAKTFNFDEYQKTYRGQMWVLMKNGIVDVEATNAYNAAVLGGEMPHESNEAQEEAELLQAVVQSVKEGTDPVTGQEISKAQGFGIISGLIFRYTAGGYKGKKFKIPRDWLHRRKKNNGVEVGTDFGKIGKLVNHPNIKINWSEYAEHGMSRLKQRGLSKSQVDDFVEHG-KVLSQNEGEKFAFITEDGVAIVSKDGKLVTAWGKKDFDEGMKKIIGKLYGK |
| 1YT3 Chain:A ((1-375)) | MNYQMITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGITDWSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLID-------------TQILAAFCGRPMSWGFASMVEEYS---GVTLDKSESRTDWLARPLT-----ERQCEYAAADVWY--LLPITAKLMVETEASGWLPAALDECRLMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFV----VREEHLWSVARYMPGSLGELDSLGL---------SGSEIRFHGKTLLALVEKAQTLPEDALPQPMLNLMDMP------------GYR-KAFKAIKSLITDVSETH--------------------KISAELLA------------SRRQINQLLNWHWKLKPQNN-----------------LPELISGWRGELMAEALHNLLQE-YPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15894 for 2793 contacts (5.7/contact) +
2D Compatibility (PS) -37993 + (NN) -4406 + (LL) 6172
1D Compatibility (HY) -14400 + (ID) 2900
Total energy: -37633.0 ( -13.47 by residue)
QMean score : 0.281
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