Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDWDFNNPESMKAWDLASGSYAEQVSG------
4GDK Chain:C ((3-36))
MPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLL
General information:
TITO was launched using:
RESULT:
Template:
4GDK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4318 for 113 contacts (38.2/contact) +
2D Compatibility (PS) -2959 + (NN) -243 + (LL) 0
1D Compatibility (HY) 0 + (ID) 300
Total energy: 816.0 ( 7.22 by residue)
QMean score : 0.141
(partial model without unconserved sides chains):
PDB file :
Tito_4GDK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GDK-query.scw
PDB file :
Tito_Scwrl_4GDK.pdb
: