Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKWSFLVVTVLAFVLVLAGCGASNDKVSGDKDKLKVVTTFYPMYDFTKNVAGDNASIEMLIDAGTEPHDYEPSAKDIAKIEAADVFVYNSEDMET---WVPSVLKSLDS--KKLTVIDASKGIE---LVEGTEEEDHDHEHEEGHHHEHDPHVWLSPVLAEQEVTNIQNGLTKADKTNADTYKKNAETYKEKLKTLDNKFKTAFEG--AKQRDFVTQHAAFQYLAKEYDLHQVAIAGLSPDQEPSPARLAELQKYVKENNISTIYFEEVASPKVAETLANETGAKLEVLSPIEGITDKEQKKGMD---YIAYMEQNLQALQKTIK |
4OXR Chain:B ((8-285)) | ---------------------------------KLKIVTTNSILYDMTKNITGDKAEIHSIVPVGQDPHEYEIKPKDVQALTDADVIIYNGFNLESGNGWFEKALKQANKSIKDDSVIQASKNVKPIYLKQGEKSE-----------HNIDPHAWLSLGNGIEYVKTIKSALENADKTHAKDYDKQGTEYLSKLEKLNKESKDKFNDIPKEKRVMITSEGAFKYFAQQFDVKPGYIWEINTENQGTPEQMKQAVDFVKENHIKNLLLETSVSDKSMKSLGEETGAKIYGTV----YTDSIGKKGSDGDSYYKMMESNIKTIHESMQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4OXR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -70789 for 2195 contacts (-32.3/contact) +
2D Compatibility (PS) -28614 + (NN) -11693 + (LL) 2576
1D Compatibility (HY) -17200 + (ID) 4800
Total energy: -130520.0 ( -59.46 by residue)
QMean score : 0.572
|
|
|