Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VLDTLNQLSLPEGSLLHSDQGSVYTSYEYYQCCKKKNVIRSMSRKGTPADNAPIECFHSSLKCETFYHKTAYKYAKSIVIQIVKDYIKYYNEKRIQQKLGYQSPINFRKQAA
1K6Y Chain:A ((110-202))
------------VKTVHTDNGSNFTSTTVKAACDWAGIKQED---------GVIESMNKELKKIIGQVR----DQAEHLKTAVQMAVFIHNK-KRKGGIGGYSAGERIVD--
General information:
TITO was launched using:
RESULT:
Template:
1K6Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6367 for 451 contacts (-14.1/contact) +
2D Compatibility (PS) -8406 + (NN) 153 + (LL) 1416
1D Compatibility (HY) 3200 + (ID) 750
Total energy: -10754.0 ( -23.84 by residue)
QMean score : 0.193
(partial model without unconserved sides chains):
PDB file :
Tito_1K6Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K6Y-query.scw
PDB file :
Tito_Scwrl_1K6Y.pdb
: