Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKTIASIKTNLDSRLGKALTLKANGGRKKTIERCGILAETYPSVFIVELDQDENNFERVSYSYTDILTDAVELVFTDDNKELAL
3JB9 Chain:E ((4-50))
---------TKMVSLLNHSLNVTTKDGR----TFVGQLLAF--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3JB9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1080 for 107 contacts (10.1/contact) +
2D Compatibility (PS) -2980 + (NN) -520 + (LL) 4404
1D Compatibility (HY) -2000 + (ID) 400
Total energy: -416.0 ( -3.89 by residue)
QMean score : 0.588
(partial model without unconserved sides chains):
PDB file :
Tito_3JB9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JB9-query.scw
PDB file :
Tito_Scwrl_3JB9.pdb
: