Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKWVKWLIVIVIIAVVAVGAVFLLSKNSGSVTQEKLVTAKVKQGDMKINATGTGAISPVNT---QVPD---YDELQLVAQMDELDIPNIKKDQEVKVTVTALPDKTYTGKVKEIAEQGQVQNGVSSFSVIIS-LDKTDDLKAGMTADASILVNEKKDALYVPIEAVQKDSDDKYYVLVPEEKDNGKTKKVKKFVETGLHNEDNIEITKGVKKGEKVILPTQETSTVPGAPS |
| 3FPP Chain:A ((191-308)) | -------------------------------------------AGEVTQITTLQGQTVIAAQQAPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLT----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18477 for 555 contacts (-33.3/contact) +
2D Compatibility (PS) -11500 + (NN) 1271 + (LL) 8544
1D Compatibility (HY) -2400 + (ID) 1100
Total energy: -23662.0 ( -42.63 by residue)
QMean score : 0.365
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