Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEVKEYKQLNGLALAYMGDAVYEKFIREYLLA-AGKTKPNQLHKTATKFVSAKGQAVALKAMIAEGFLTEEEDRIAKRGRNAKSYTVPKNTDPGTYSMSTSFEAVLGYLYLAGEMERLQEWMEKALEIVEKGVETN
3O2R Chain:A ((58-166))
---------YNNERLEFLGDAVLDLVVGEYLFHKFAKDAEGDLSKLRAALVNEKSFAKIANSLNLGD--------FILMSVAEENNGGKE----KPSILSDALEAIIGAIHLEAGFEFAKTIALRLIEKN-------
General information:
TITO was launched using:
RESULT:
Template:
3O2R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41865 for 757 contacts (-55.3/contact) +
2D Compatibility (PS) -11721 + (NN) -4890 + (LL) 1808
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -62568.0 ( -82.65 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_3O2R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O2R-query.scw
PDB file :
Tito_Scwrl_3O2R.pdb
: