Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKKTSLACSECGSRNYTVNVSGTQKETRLEVKKFCRHCNKHTLHRETK
3P0K Chain:A ((150-164))
-----------------------------VFFILQCAMCRDHYM-----
General information:
TITO was launched using:
RESULT:
Template:
3P0K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1678 for 53 contacts (-31.7/contact) +
2D Compatibility (PS) -1366 + (NN) 922 + (LL) 1856
1D Compatibility (HY) -1600 + (ID) 150
Total energy: -2016.0 ( -38.04 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_3P0K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P0K-query.scw
PDB file :
Tito_Scwrl_3P0K.pdb
: