Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNIMLVCNAGMSTGMLAKKIEAAS---GNTLNVTAYSESEYTDYLDGVDLVLIGPQIRFLMPQIKQAV-SVPVHAISPVKYGIMDGKGVYEDIQKLIGG
1E2B Chain:A ((3-102))
KKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQIAYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAVAAIKK
General information:
TITO was launched using:
RESULT:
Template:
1E2B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89860 for 792 contacts (-113.5/contact) +
2D Compatibility (PS) -10548 + (NN) -4754 + (LL) 0
1D Compatibility (HY) -7600 + (ID) 1600
Total energy: -114362.0 ( -144.40 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_1E2B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E2B-query.scw
PDB file :
Tito_Scwrl_1E2B.pdb
: