Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNLFLTSSFKDVVPLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKLRKNDFIYVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGESAGAVITSPNIAYIQTMDSTKKAVNLTNYDALNLVDFSTLPHYNNTPFKEITQKIVTEYAGKSQIYPISNHEAIFIRGKEVITKRLS |
2YWJ Chain:A ((14-85)) | ----------------------------------------------EHEEAIKKAGYEAKKVKR--------VEDLEGIDALIIPGGESTAIGK-LMK--KYGLLEKIKNSNLPILGTCAGMVLLSKGT---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YWJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19822 for 426 contacts (-46.5/contact) +
2D Compatibility (PS) -8137 + (NN) -4475 + (LL) 9640
1D Compatibility (HY) -1200 + (ID) 650
Total energy: -24644.0 ( -57.85 by residue)
QMean score : 0.463
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