Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VTEKTIRLTTAQALVKFLNQQYIEVDDEMAPFVDGIFTVFGHGNVVGIGQALEEDPGHLNVYQGKNEQGMAHAAIAYAKQK-NRKRIYACSASAGPGSANLITAASTALANNLPVLFLPADTFATRQPDPVLQQLEHESSAAITTNDGFQAVSRYFDRVQRPEQLMSALIRAFEVMTNPASAGPATICIAQDTEGEAFDYPVEFFQKRIHYLNRQIPTKRELTEAARLIQASKTPVIIVGGGARYSDAREELIALSEQSNIPLVETHAGKSTVEFDFKNNLGGTGILG-TLAANKAIRDADLVIGIGTRYTDFTTSSKTAFGPATKFININVSRMQTYKLD-A-FQVVGDAKATLAELAPLLKGYQTQFGDRIAVYKAEWLAERTRLQNTKFNREAFTPEIKDQFDQATLNEYADSLQTEFTQTEALITINDTVAPDSIVVCSAGSLPGDLQRLWNPAVPNTYHLEYGYSCMGYEINGALGAKMAAANNQEVYSIVGDGSFCMSHSELLTSLQYGKKINIMLFDNSGFGCINNLQMANGSDSFF----CEFRDSDNQIMQVDYAKIAEGYGAKVYRANTKEDLISALEDAKK----QTKTTLIDMKVLPKTMSEGYLNWWNVGVSEVSNKESIKQAYEEKQTNLKNARLY |
| 2PAN Chain:A ((25-584)) | -----AKMRAVDAAMYVLEKEG----------ITTAFGVPGA-AINPFYSAMRKH-GGIRHILARHVEGASHMAEGYTRATAG--NIGVCLGTSGPAGTDMITALYSASADSIPILCITGQAPRARLHKEDFQA--------VDIEAIAKPVSKMAVTVREAALVPRVLQQAFHLMRS-GRPGPVLVDLPFDVQVAEIEFDPDMYEPLPV--YKPAASRMQIEKAVEMLIQAERPVIVAGGGVINADAAALLQQFAELTSVPVIPTLMGWGCIPDDHELMAGMVGLQTAHRYGNATLLASDMVFGIGNRFANRHTGSVEKYTEGRKIVHIDIEPTQIGRVLCPDLGIVSDAKAALTLLVEVAQEMQK---AGRLPCRKEWVADCQQRKRTLL------------------RK-THFDNVPVKPQRVYEEMNKAFGRDVCYVTTIGLSQIAAAQMLHVFKDRHWINCGQAGPLGWTIPAALGVCAADP-KRNVVAISGDFDFQFLIEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMDYCVQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVVEVILERVTNI------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PAN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201198 for 5066 contacts (-39.7/contact) +
2D Compatibility (PS) -59679 + (NN) -25055 + (LL) 5792
1D Compatibility (HY) -22000 + (ID) 5850
Total energy: -307990.0 ( -60.80 by residue)
QMean score : 0.425
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