Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIKNKVIIITGASSGIGKATALLLAEKGAKLVLAARRVEKLEKIVQTIKANSGEAIFAKTDVTKREDNKKLVELAIERYGKVDAIFLNAGIMPNSPLSALKEDEWEQMIDINIKGVLNGIAAVLPSFIAQKSGHIIATSSVAGLKAYPGGAVYGATKWAVRDLMEVLRMESAQEGTNIRTVTIYPAAINTELLETITDKETEQGMTSLYKQYG--ITPDRIASIVAYAIDQPEDVNVNEFTVGPTSQPW
3P19 Chain:C ((17-251))
-----KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL------NLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVA--ASNVRVMTIAPSAVKTELLS------------------GGVLAADDVARAVLFAYQQPQNVCIREIALAPTKQ--
General information:
TITO was launched using:
RESULT:
Template:
3P19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131569 for 1817 contacts (-72.4/contact) +
2D Compatibility (PS) -23534 + (NN) -11004 + (LL) 2744
1D Compatibility (HY) -16400 + (ID) 4550
Total energy: -184313.0 ( -101.44 by residue)
QMean score : 0.669
(partial model without unconserved sides chains):
PDB file :
Tito_3P19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P19-query.scw
PDB file :
Tito_Scwrl_3P19.pdb
: