Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------------------------------------------------------------------------------------------------------------------------------------------------VKKLVAWFNGLSKMWKVVVIIGAVFVVIIALTTGEDEGEQTKTKKDSNKVVKTASRPKLSTKDLALIKADLAEFEARELSSEKILKDTI--KEESWSDLDFANDNINQMIGTMKRYQQEILSIDAIKRSSEASADTEAFKKIFKEWSEFKIERIQVTIDLLNGKKDSEAVFKKTYPNQIIFKKVRTNKLQTALNNLKVGYELLDSQK-------------------------------------------
1YT3 Chain:A ((1-375))MNYQMITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGITDWSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFASMVEEYSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAALDECRLMQMRRQEVVAPEDAWRDITNAWQ--LRTRQLACLQL-LADWRLRKARERDLAVNFVVREEHLWSVARY-------MPGSLGELDSLGLS------GSEIRFHGKTLLALVEKAQTLPEDALPQPMLNLMDMPGYRKAFKAI--KSLITDVSETHK---------ISAELLASRRQINQLLNWHWKLKPQNNLPELISGWRGELMAEALHNLLQEYPQ


General information:
TITO was launched using:
RESULT:

Template: 1YT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1975 for 1085 contacts (-1.8/contact) +
2D Compatibility (PS) -18407 + (NN) -4109 + (LL) 1340
1D Compatibility (HY) -4800 + (ID) 1500
Total energy: -29451.0 ( -27.14 by residue)
QMean score : 0.276

(partial model without unconserved sides chains):
PDB file : Tito_1YT3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YT3-query.scw
PDB file : Tito_Scwrl_1YT3.pdb: